
by Dr. Mark Cruz da Silva – Clinical Microbiologist, Immunology Department
PATHCHAT Edition No. 12
Please contact your local Ampath pathologist for more information.
Understanding Encephalitis
🔹 Definition & Diagnosis:
- Encephalitis refers to inflammation of the brain, typically diagnosed clinically.
- Diagnosis is based on:
- Neurologic dysfunction (e.g., altered consciousness, seizures).
- Corroborating findings from CSF analysis, EEG, and neuroimaging.
- Common causes include:
- Infections (HSV, enteroviruses).
- Seizures.
- Metabolic encephalopathy.
- Toxic causes (e.g., overdose).
- Cerebrovascular accidents.
🔹 Why Autoimmune Encephalitis (AE) Matters:
- Some patients have no clear infectious or metabolic cause.
- AE is increasingly recognized and may mimic infectious encephalitis.
- Early diagnosis is critical, as delayed treatment can cause irreversible brain damage.
What is Autoimmune Encephalitis (AE)?
🔹 Definition & Prevalence:
- AE is an immune-mediated encephalitis, caused by either humoral (antibody-mediated) or cellular immune pathways.
- Previously considered rare, AE is now diagnosed as often as HSV and enteroviral encephalitis, particularly NMDAR encephalitis.
- Timely treatment leads to better outcomes, emphasizing the need for early recognition.
Types of Autoimmune Encephalitis
1. T-Lymphocyte Mediated Neurological Syndromes
Example: Paraneoplastic Limbic Encephalitis (PLE)
- Mechanism:
- Onconeuronal autoantibodies attack intracellular neuronal antigens.
- CD8+ T-cells induce cytotoxic damage, leading to neurodegeneration.
- PLE is often associated with cancer, particularly:
- Small cell lung carcinoma (SCLC) → Anti-Hu (ANNA-1) and Anti-CV2 (CRMP5) antibodies.
- Thymoma → Anti-CV2 antibodies.
- Paraneoplastic stiff-person syndrome → Anti-amphiphysin antibodies.
- Testicular seminoma → Anti-Ma2 antibodies.
🔹 Key Facts About PLE:
- In 70–80% of cases, PLE is diagnosed BEFORE cancer is detected.
- Severe neurological deficits often persist despite treatment.
- Treatment:
- Tumor resection (if present).
- Immunotherapy (IVIG, corticosteroids, or both).
2. Autoantibody-Mediated Neurological Syndromes
Example: Anti-NMDA Receptor (NMDAR) Encephalitis
🔹 Mechanism:
- Autoantibodies target cell surface antigens that regulate neuronal function and plasticity.
- Unlike PLE, neurological recovery is more likely with treatment.
🔹 Clinical Presentation of NMDAR Encephalitis:
- Prodromal viral-like illness followed by:
- Psychiatric symptoms (hallucinations, aggression, paranoia).
- Insomnia and memory loss.
- Seizures and movement disorders (dyskinesias).
- Autonomic instability.
- Language dysfunction.
🔹 Epidemiology:
- Primarily affects young women (<30 years old).
- Two-thirds of cases occur in individuals under 18.
- Often associated with ovarian teratomas (50% of women >18 years old with NMDAR encephalitis).
- In patients >45 years old, often linked to carcinoma.
🔹 Diagnosis:
- Detection of NR1 subunit antibodies in CSF or serum.
- Key study (California Encephalitis Project):
- NMDAR encephalitis is more common in young patients than HSV or enterovirus encephalitis.
- MRI, EEG, and CSF findings differ from viral encephalitis.
🔹 Treatment:
- First-line:
- Tumor resection (if applicable).
- Immunotherapy (IVIG, corticosteroids, or both).
- Second-line (if non-responsive):
- Rituximab or cyclophosphamide.
- Early treatment improves recovery (up to 80% response rate).
Other Autoimmune Encephalitides & Associated Antibodies
🔹 Other Antibody-Associated Syndromes:
- LGI1 (Leucine-Rich Glioma-Inactivated 1) → Limbic encephalitis, seizures, and hyponatremia.
- CASPR2 (Contactin-Associated Protein-Like 2) → Encephalitis, neuropathy, and Morvan syndrome.
- AMPA receptor → Autoimmune epilepsy and encephalitis.
- GABA receptor → Autoimmune epilepsy and encephalitis.
🔹 Diagnostic Approach:
- CSF and serum antibody testing for NMDAR, LGI1, CASPR2, AMPA, and GABA receptors.
- CSF titers correlate better with clinical severity in NMDAR encephalitis.
- For LGI1-associated limbic encephalitis, serum titers are typically higher than CSF titers.
Key Clinical Takeaways
✅ Autoimmune encephalitis should be considered in any case of unexplained encephalitis.
✅ Patients with suspected limbic encephalitis should undergo a tumor screen, even if autoantibodies are absent.
✅ Some encephalitides (e.g., NMDAR and LGI1) respond well to early immunotherapy.
✅ NMDAR antibody testing should be requested alongside HSV and enteroviral PCR in young patients with encephalitis symptoms.
✅ CSF and serum samples should be tested for neuronal and GAD65 antibodies.
Recommended Diagnostic Tests at Ampath
🔹 For Paraneoplastic Encephalitis:
- Immunofluorescence for anti-Hu, Ri, and Yo antibodies.
- Line immunoassay for anti-Hu, Ri, Yo, Ma2, CV2, and amphiphysin.
- ELISA for anti-GAD65 antibodies (ordered separately).
🔹 For Autoimmune Encephalitis:
- NMDAR antibodies (CSF and serum).
- LGI1, CASPR2, AMPA, and GABA receptor antibodies.
References
- Dalmau J, Lancaster E, Martinez-Hernandez E, et al. (2011). Clinical experience and laboratory investigations in patients with anti-NMDAR encephalitis. Lancet Neurology, 10:63–74.
- Gable MS, Sheriff H, Dalmau J, et al. (2012). The frequency of autoimmune N-methyl-D-aspartate receptor encephalitis surpasses that of individual viral etiologies in young individuals enrolled in the California Encephalitis Project. Clinical Infectious Diseases, 54: 899–904.
- Rose N, Mackay I. (2014). The Autoimmune Diseases (5th edition). Academic Press.
- Shoenfeld Y, Meroni PL. (2012). The General Practice Guide to Autoimmune Diseases. Pabst Science Publishers.